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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs848297 chr1:16314785 A/G 2.07E-9 488 15.2 17.93 13.23 KM Plot
THCA rs848311 chr1:16309117 A/C 1.63E-11 485 15.2 17.93 12.63 KM Plot
THCA rs848314 chr1:16310352 T/A 2.08E-9 488 15.17 17.93 13.23 KM Plot
THCA rs866902 chr11:4159770 AT/A 1.74E-7 490 19.05 13.9 16.38 KM Plot
THCA rs867657 chr8:8124510 C/T 1.87E-6 490 13.5 17.7 15.07 KM Plot
THCA rs870038 chr1:16345368 C/T 1.34E-11 488 15.17 18.63 12.63 KM Plot
THCA rs872137 chr8:8119987 C/G 0.000135 490 15.23 18.43 12.38 KM Plot
THCA rs872221 chr1:16344683 C/T 1.54E-11 487 15.17 17.93 12.63 KM Plot
THCA rs872376 chr1:179794602 A/G 3.59E-8 480 15.83 16.37 9.55 KM Plot
THCA rs8738 chr21:37420650 G/A 2.92E-5 490 16.67 13.5 12.82 KM Plot
THCA rs873921 chr14:23229974 C/T 1.53E-9 490 19.02 16.67 15.33 KM Plot
THCA rs876106 chr16:20694194 A/C 5.79E-5 488 16.37 14.5 17.47 KM Plot
THCA rs876761 chr1:91780408 A/G 7.89E-6 489 15.63 17.03 17.77 KM Plot
THCA rs877629 chr1:22456895 A/G 2.7E-7 476 15.63 18.47 6.72 KM Plot
THCA rs8786 chr14:23240328 A/T 7.5E-5 490 15.32 15.42 21.75 KM Plot